BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019B01SP1|AL427426
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig307 1662 0.0
>3x_Contig307
Length = 1772
Score = 1662 bits (836), Expect = 0.0
Identities = 845/851 (99%)
Strand = Plus / Minus
Query: 7 gtttatgaccccattaattgtctggtttggtagatcagctctttctgatttacttaaggy 66
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 gtttatgaccccattaattgtctggtttggtagatcagctctttctgatttacttaaggc 936
Query: 67 gggcttccatattgcgtctaagttggacttaacaggtttttccattagagttccgatcgt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 gggcttccatattgcgtctaagttggacttaacaggtttttccattagagttccgatcgt 876
Query: 127 attataagatgccacagaatcatctttggaagaagatggtgggtttatcaattcgggaag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 attataagatgccacagaatcatctttggaagaagatggtgggtttatcaattcgggaag 816
Query: 187 agagttctttgcaataggttcgtatgttgatgactcgatcattggtatatyattgtctct 246
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 815 agagtcctttgcaataggttcgtatgttgatgactcgatcattggtatatcattgtctct 756
Query: 247 tggatcatatgataagccctttcctgcagatggtccattattgttgaaatcagcaggaga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tggatcatatgataagccctttcctgcagatggtccattattgttgaaatcagcaggaga 696
Query: 307 aaaatcgctatcatcatcttctgagcttgatatattacttgtacttatcccaaattgtat 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 aaaatcgctatcatcatcttctgagcttgatatattacttgtacttatcccaaattgtat 636
Query: 367 tggttcgtcattggtgttcgagttaacagaaaacttacctccattcttgtacttgttatc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tggttcgtcattggtgttcgagttaacagaaaacttacctccattcttgtacttgttatc 576
Query: 427 cacattactttcaaagatggggttgaaattgagtggtgcgaatatacttttctttctgtc 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cacattactttcaaagatggggttgaaattgagtggtgcgaatatacttttctttctgtc 516
Query: 487 ttttggggtttcaataggcaaaggtgctcctggatcttcgtataatgtaggtgtcttttc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ttttggggtttcaataggcaaaggtgctcctggatcttcgtataatgtaggtgtcttttc 456
Query: 547 tatagtaatgacatccactggtatgtccaaataggtacgctttgttcttgtcttcttttc 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tatagtaatgacatccactggtatgtccaaataggtacgctttgttcttgtcttcttttc 396
Query: 607 gtcagtatcaatagactcgatggtgtngggacgatcaaactttaacgagttactagttga 666
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 395 gtcagtatcaatagactcgatggtgtcgggacgatcaaactttaacgagttactagttga 336
Query: 667 tccgtcagcctcatcgtcatcttcggctagatcaaacatttcgtcagtwatctcttttac 726
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 335 tccgtcagcctcatcgtcatcttcggctagatcaaacatttcgtcagtaatctcttttac 276
Query: 727 agataccagttcttcgttcttatttcgcgtactgacatcttcgtcgctatcttcaccaaa 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 agataccagttcttcgttcttatttcgcgtactgacatcttcgtcgctatcttcaccaaa 216
Query: 787 aagatctttgtcgaattctacatgctcgtgttcctctatcgaaatattctgagcgggrga 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 215 aagatctttgtcgaattctacatgctcgtgttcctctatcgaaatattctgagcgggaga 156
Query: 847 ttcaaaagcgg 857
|||||||||||
Sbjct: 155 ttcaaaagcgg 145
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6587
Number of Sequences: 1807
Number of extensions: 6587
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)